BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A12LP1|AL428837
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1030 1634 0.0
>3x_Contig1030
Length = 5200
Score = 1634 bits (818), Expect = 0.0
Identities = 852/867 (98%), Gaps = 2/867 (0%)
Strand = Plus / Plus
Query: 1 ccgatgwtagttttgatagctcttctggtttatcaaatcttgtgtcaccatgaatgtaat 60
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1879 ccgatgatagttttgatagctcttctggtttatcaaatcttgg--caccatgaatgtaat 1936
Query: 61 caaagtcttttcgccatcgccgttgttacgaactaatgtgatgttttcacggacaagagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 caaagtcttttcgccatcgccgttgttacgaactaatgtgatgttttcacggacaagagg 1996
Query: 121 atactgggagahatgggtgtcgatttcccctaattcaattctgaaacctctaatcttaac 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 atactgggagatatgggtgtcgatttcccctaattcaattctgaaacctctaatcttaac 2056
Query: 181 ttgatcatcagcacggccacaacattcagcattgccatctggtaagtaacggcccaaatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 ttgatcatcagcacggccacaacattcagcattgccatctggtaagtaacggcccaaatc 2116
Query: 241 accagttctgtataahcyatctcttggcccaagccagaattccctccaaggttcaccatt 300
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 accagttctgtataatctatctcttggcccaagccagaattccctccaaggttcaccatt 2176
Query: 301 atccttatctaaggatttccaatggccctcttccacgaaccagttgttgataaahntctc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2177 atccttatctaaggatttccaatggccctcttccacgaaccagttgttgataaatttctc 2236
Query: 361 tttgtttgcctctggtaaaccacggtattcggcagctaagcctccagcacgtacatatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 tttgtttgcctctggtaaaccacggtattcggcagctaagcctccagcacgtacatatat 2296
Query: 421 vncaccaacttctcctaccccacaaatttgagttctatcatgtctgttgacaacaagaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 ttcaccaacttctcctaccccacaaatttgagttctatcatgtctgttgacaacaagaag 2356
Query: 481 ttgcacattatacatacctttgccggcaggtatgacatccttcaacttttgtaggaactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 ttgcacattatacatacctttgccggcaggtatgacatccttcaacttttgtaggaactg 2416
Query: 541 tggatcctcagaccttgatttgacagtgaagtaagagactgcacgttgtgtttcagtggt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 tggatcctcagaccttgatttgacagtgaagtaagagactgcacgttgtgtttcagtggt 2476
Query: 601 accatacatgtsaataasabsaacgttttcggctaaagtttggagtctcaagcagtctct 660
||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 accatacatgttaataatattaacgttttcggctaaagtttggagtctcaagcagtctct 2536
Query: 661 cttagtcaagatatcaccaacgaagaaagcatgatgcaactttgggaatggtgtggttgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 cttagtcaagatatcaccaacgaagaaagcatgatgcaactttgggaatggtgtggttgc 2596
Query: 721 ttgagcagccaatagctgacccatagcaggagtcaaatgtgtgacggtagccccatattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2597 ttgagcagccaatagctgacccatagcaggagtcaaatgtgtgacggtagccccatattt 2656
Query: 781 ggccatccatgaagctaattgacctggtgttccgatatcatcttgagttggaacaagcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2657 ggccatccatgaagctaattgacctggtgttccgatatcatcttgagttggaacaagcaa 2716
Query: 841 ctgagcacctaagaacagtggggtgaa 867
|||||||||||||||||||||||||||
Sbjct: 2717 ctgagcacctaagaacagtggggtgaa 2743
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4847
Number of Sequences: 1807
Number of extensions: 4847
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)